PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.4PC58
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 418aa    MW: 47145.7 Da    PI: 8.7452
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.4PC58genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.0016363382323
                  ETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                  C+ Cgk+F  ++ + +H++++
  Aradu.4PC58 363 CSLCGKPF-KPEKMYKHMKSC 382
                  ********.*********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF061363.6E-3911248IPR010369Protein of unknown function DUF966
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MEAKGEVRRL HIIYFLSNIG GRPDHPHLIR VLHLARNGVY LRDVKMWLGE LRGKDLPEAF  60
SWSYKRRYKS GYVWQDLLDD DLITPISDNE YVLKGSQIHP TPFENFSPDG KTKSPQVHVT  120
EGKQQPSLIE EESRIIGRDR ESKMDTPTKV SSEISQDSLV FSSERSSVTT DGYESCKAEE  180
EKEKPSVRSN KECSIEKEHE KPENCALPSL YHKLLSKSIG NKEEQNKTDT PDSSFSTSSS  240
SSSQSSFSKL RNSSNRVSMA FRNWISCGTV DTNDAALIRM GDAKKIDSNE SMTNLPENKA  300
QICKGDKFGG SARCFRISWN NDQQENQHGA RKSFDGEETN RSRRKLGDFL NQTHHKPLGE  360
PICSLCGKPF KPEKMYKHMK SCKGIKALGT STATAALADK TQLHRSSTSN HTNYLLTN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015932561.10.0PREDICTED: uncharacterized protein LOC107458866
TrEMBLA0A0L9UJ631e-179A0A0L9UJ63_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SJR11e-178A0A0S3SJR1_PHAAN; Uncharacterized protein
STRINGGLYMA08G16910.21e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83781620